source package
Submodules
- source.full_qed_matrix module
- source.functions module
- source.qed_adc_in_std_basis_with_self_en module
- source.qed_amplitude_vec module
- source.qed_matrix_from_diag_adc module
- source.qed_matrix_working_equations module
- source.qed_mp module
- source.qed_npadc_exstates module
- source.qed_npadc_s2s_tdm_terms module
- source.qed_ucc module
- source.refstate module
- source.test_methods module
- source.workflow module
Module contents
- source.run_qed_adc(data_or_matrix, coupl=None, freq=None, qed_hf=True, gs='mp', qed_coupl_level=1, n_states=None, kind='any', conv_tol=None, eigensolver='davidson', guesses=None, n_guesses=None, n_guesses_doubles=None, output=<_io.TextIOWrapper name='<stdout>' mode='w' encoding='utf-8'>, core_orbitals=None, frozen_core=None, frozen_virtual=None, method=None, n_singlets=None, n_triplets=None, n_spin_flip=None, environment=None, **solverargs)
Run an ADC calculation.
Main entry point to run an ADC calculation. The reference to build the ADC calculation upon is supplied using the data_or_matrix argument. adcc is pretty flexible here. Possible options include:
Hartree-Fock data from a host program, e.g. a molsturm SCF state, a pyscf SCF object or any class implementing the
adcc.HartreeFockProviderinterface. From this data all objects mentioned in (b) to (d) will be implicitly created and will become available in the returned state.A
polaritonic_adcc.refstateobjectA
polaritonic_adcc.qed_mpobjectA
polaritonic_adcc.qed_matrix_fullobject
- Parameters:
data_or_matrix – Data containing the SCF reference
n_states (int, optional) –
kind (str, optional) –
n_singlets (int, optional) –
n_triplets (int, optional) –
n_spin_flip (int, optional) – Specify the number and kind of states to be computed. Possible values for kind are “singlet”, “triplet”, “spin_flip” and “any”, which is the default. For unrestricted references clamping spin-pure singlets/triplets is currently not possible and kind has to remain as “any”. For restricted references kind=”singlets” or kind=”triplets” may be employed to enforce a particular excited states manifold. Specifying n_singlets is equivalent to setting kind=”singlet” and n_states=5. Similarly for n_triplets and n_spin_flip. n_spin_flip is only valid for unrestricted references.
conv_tol (float, optional) – Convergence tolerance to employ in the iterative solver for obtaining the ADC vectors (default: 1e-6 or 10 * SCF tolerance, whatever is larger)
eigensolver (str, optional) – The eigensolver algorithm to use.
n_guesses (int, optional) – Total number of guesses to compute. By default only guesses derived from the singles block of the ADC matrix are employed. See n_guesses_doubles for alternatives. If no number is given here n_guesses = min(4, 2 * number of excited states to compute) or a smaller number if the number of excitation is estimated to be less than the outcome of above formula.
n_guesses_doubles (int, optional) – Number of guesses to derive from the doubles block. By default none unless n_guesses as explicitly given or automatically determined is larger than the number of singles guesses, which can be possibly found.
guesses (list, optional) – Provide the guess vectors to be employed for the ADC run. Takes preference over n_guesses and n_guesses_doubles, such that these parameters are ignored.
output (stream, optional) – Python stream to which output will be written. If None all output is disabled.
core_orbitals (int or list or tuple, optional) – The orbitals to be put into the core-occupied space. For ways to define the core orbitals see the description in
adcc.ReferenceState. Required if core-valence separation is applied and the input data is given as data from the host program (i.e. option (a) discussed above)frozen_core (int or list or tuple, optional) – The orbitals to select as frozen core orbitals (i.e. inactive occupied orbitals for both the MP and ADC methods performed). For ways to define these see the description in
adcc.ReferenceState.frozen_virtual (int or list or tuple, optional) – The orbitals to select as frozen virtual orbitals (i.e. inactive virtuals for both the MP and ADC methods performed). For ways to define these see the description in
adcc.ReferenceState.environment (bool or list or dict, optional) – The keywords to specify how coupling to an environment model, e.g. PE, is treated.
coupl (list or tuple or numpy array of length 3, optional) – x, y, z coupling vector to the cavity photon. Use the definition 1 / sqrt(2 * freq * eps_0 * eps_r * V)!
freq (list or tuple or numpy array or int, optional) – Energy of the cavity photon.
qed_hf (bool, optional) – Specify, whether a standard or polaritonic SCF result is provided.
gs (str, optional) – Which ground state reference to use
qed_coupl_level (bool or int, optional) – Specify, whether to calculate the full matrix (False), or provide the perturbative level to which polaritonic coupling shall be included into a truncated state space approach (1 or 2).
max_subspace (int, optional) – Maximal subspace size
max_iter (int, optional) – Maximal number of iterations
- Returns:
An
adcc.ExcitedStatesobject orpolaritonic_adcc.qed_npadc_exstatesobject, which inherits from the previous object, containing thepolaritonic_adcc.full_qed_matrix, thepolaritonic_adcc.qed_mpground state and thepolaritonic_adcc.refstateas well as computed eigenpairs.- Return type:
ExcitedStates
Examples
Run an ADC(3) calculation on top of a non-polaritonic pyscf RHF reference of hydrogen flouride, building the qed matrix in a truncated state basis.
>>> from pyscf import gto, scf ... mol = gto.mole.M(atom="H 0 0 0; F 0 0 1.1", basis="sto-3g") ... mf = scf.RHF(mol) ... mf.conv_tol_grad = 1e-8 ... mf.kernel() ... ... state = run_qed_adc(mf, method="adc3", n_singlets=3, freq=[0., 0., 0.5], coupl=[0., 0., 0.1], qed_hf=True)
Run an ADC(2) calculation of O2 with a polaritonic psi4 reference, building the full polaritonic matrix.
>>> import hilbert ... mol = psi4.geometry(f''' ... 0 1 ... O 0.0 0.0 0.0 ... O 0.0 0.0 1.2 ... units angstrom ... symmtery c1 ... no_reorient ... ''') ... psi4.core.be_quiet() ... psi4.set_options({'basis': 'sto-3g', 'scf_type': 'df', 'e_convergence': 1e-10}) ... psi4.set_module_options('hilbert': {'cavity_frequency': [0.0, 0.0, 0.4], 'cavity_coupling_strength': [0.0, 0.0, 0.1]}) ... scf_e, wfn = psi4.energy('scf', return_wfn=True) ... state = run_qed_adc(mf, n_singlets=3, freq=[0., 0., 0.4], coupl=[0., 0., 0.1], qed_coupl_level=False)